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SUSPECIES table

Below we show the proportion of fill rows (blue) and frequency of variables across the suspecies DB broken per species type (i.e. amphibians, fishes, birds, mammals, insects, reptiles). Site, site visit variables, trapping effort (sutrap) species name and type are excluded as it is a given that these variables need to be included when present. Broadly the tables can be broken into species type and type of sampling (opportunistic and survey-based). We identified 23 variavles, most variables are self-explanatory and vocabularies can easily be created for them. It would be important to go through a review process with data owners to choose variables to be included.

These tables contain two FOI’s, animal occurrences (for opportunistic method) or animal individuals for the rest

Tables per species type

The analyses have been broken into tables per species type, as many methods and parameters are species-specific.

Invertebrate

There are 1,064 rows, from those 1,063 are opportunistic and only one is survey-based (probably a misclassification).

Column name

Proportion of empty rows

SITEID

0.412594

VISITNR

0.0

VISITDATE

0.0

QUADSITE

0.99906015

PATCHID

0.0

METHODNR

0.0

SITETYPE

0.0

species_name

0.0

NUMOBSERVED

0.0

SPCOMM

0.0028195488

ISCERTAIN

0.0

RECSTATUSCODE

0.0

LENGTH

0.9567669

LENGTHMETHOD

0.9567669

ACTIVITY

0.91917294

PLANTEDRELEASED

0.0

Birds

There are 2,766,896 observations, from those 2,361,902 are opportunistic and 404,994 are survey-based.

Column name

Proportion of empty rows

SITEID

0.6974667

VISITNR

0.0

VISITDATE

0.0

QUADSITE

0.84456664

PATCHID

0.0

METHODNR

0.0

STRATANR

0.9468667

MACROHABNR

0.95743334

SITETYPE

0.0

species_name

0.0

NUMOBSERVED

0.0

MICROHABNR

0.9484

TISSUE

0.99983335

SPCOMM

0.33786666

ISCERTAIN

0.0

SEX

0.99976665

RECSTATUSCODE

0.0

SIGHTINGNR

0.3885

ACTIVITY

0.9782

PLANTEDRELEASED

0.0

Amphibians

There are 47,820 rows, from those 44,331 are opportunistic, and 3,489 come from survey methods.

Column name

Proportion of empty rows

SITEID

0.7898

VISITNR

0.0

VISITDATE

0.0

QUADSITE

0.9271

PATCHID

0.0

SITETYPE

0.0

LINENR

0.971

METHODNR

0.0

STRATANR

0.9884667

MACROHABNR

0.9906333

species_name

0.0

NUMOBSERVED

0.0

MICROHABNR

0.99036664

TISSUE

0.9862

SPCOMM

0.1218

ISCERTAIN

0.0

SEX

0.99883336

WEIGHT

0.99633336

SNOUT

0.9999

RECSTATUSCODE

0.0

SIGHTINGNR

0.2451

LENGTH

0.99483335

LENGTHMETHOD

0.99483335

PLANTEDRELEASED

0.0

Mammals

There are 347,403 rows, 267,996 are from opportunistic methods, and 79,407 are from survey-based methods.

Column name

Proportion of empty rows

SITEID

0.6694

VISITNR

0.0

VISITDATE

0.0

QUADSITE

0.7693

PATCHID

0.0

LINENR

0.9212667

METHODNR

0.0

STRATANR

0.9755

MACROHABNR

0.9762

SITETYPE

0.0

species_name

0.0

NUMOBSERVED

0.0

MICROHABNR

0.9842

TISSUE

0.9752

SPCOMM

0.45576668

ISCERTAIN

0.0

SEX

0.8231

TEATS

0.9784333

VAGINA

0.9754

POUCH

0.9845333

NUMPOUCH

0.9989333

TESTES

0.9635

WEIGHT

0.8860667

RECSTATUSCODE

0.0

SIGHTINGNR

0.66496664

LENGTH

0.95606667

LENGTHMETHOD

0.95603335

ACTIVITY

0.99986666

PLANTEDRELEASED

0.0

Fish

There are 278,914 rows, 278,913 are from opportunistic sightings, and 1 from survey-based methods (probably a misclassification).

Column name

Proportion of empty rows

SITEID

0.30493334

VISITNR

0.0

VISITDATE

0.0

PATCHID

0.0

METHODNR

0.0

SITETYPE

0.0

species_name

0.0

NUMOBSERVED

0.0

SPCOMM

0.6362333

ISCERTAIN

0.0

SEX

0.98066664

WEIGHT

0.94516665

RECSTATUSCODE

0.0

LENGTH

0.14366667

LENGTHMETHOD

0.14366667

ACTIVITY

0.9757

PLANTEDRELEASED

0.0

Reptiles

There are 194,895 rows, 138,916 are from opportunistic sighting 55,979 are from survey-based methods

Column name

Proportion of empty rows

SITEID

0.64203334

VISITNR

0.0

VISITDATE

0.0

QUADSITE

0.7113

PATCHID

0.0

LINENR

0.8857667

METHODNR

0.0

STRATANR

0.89306664

MACROHABNR

0.88766664

species_name

0.0

NUMOBSERVED

0.0

MICROHABNR

0.9098667

TISSUE

0.9263

SPCOMM

0.4187

ISCERTAIN

0.0

SEX

0.9584

WEIGHT

0.9628

SNOUT

0.97833335

ISGRAVID

0.99866664

RECSTATUSCODE

0.0

LENGTH

0.9457

LENGTHMETHOD

0.9457

PLANTEDRELEASED

0.0

SUVERTPRESENCE

This table contains 22,967 observations about animal occurrence inferrred by different methods (e.g. presence of dung, tracks, burrows). As such this dataset can be modelled as an animal occurrence with a single parameter (animal type).

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